Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs55849324 chr7:66311163 A/G CCT6P1 chr7:65216129-65228341:+ 0.43 6.72 5.27E-11 Box Plot
THCA rs55861985 chr2:113029127 C/T RGPD5 chr2:110550335-110615272:+ -0.48 -6.91 1.58E-11 Box Plot
THCA rs55872795 chr2:132198497 C/T CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs55874223 chr5:49790384 C/T LOC647121 chr1:121260910-121313686:+ -0.37 -7.92 1.67E-14 Box Plot
THCA rs55878159 chr11:77662280 G/T INTS4L1 chr7:64601603-64694600:+ 0.7 11.32 1.71E-26 Box Plot
THCA rs55885310 chr2:101062465 T/C LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot
THCA rs55889178 chr3:90078249 G/A STX19 chr3:93733213-93747454:- 0.46 6.39 4.04E-10 Box Plot
THCA rs55889925 chr7:66397736 C/G CCT6P1 chr7:65216129-65228341:+ 0.43 6.75 4.26E-11 Box Plot
THCA rs55902942 chr10:45828050 T/A AGAP8 chr10:51224681-51371321:- 0.47 6.28 7.84E-10 Box Plot
THCA rs55908351 chr14:39874699 T/TG LOC647288 chr13:75811890-75814517:- 0.41 7.4 6.2E-13 Box Plot
THCA rs55913018 chr8:5360300 A/T EDIL3 chr5:83236373-83680611:- 0.22 5.89 7.16E-9 Box Plot
THCA rs55918163 chr14:66740465 G/T ATP6V1D chr14:67761088-67826982:- 0.3 6.24 9.49E-10 Box Plot
THCA rs55931912 chr3:90038054 G/A STX19 chr3:93733213-93747454:- 0.49 6.71 5.68E-11 Box Plot
THCA rs55934205 chr14:39726733 CTT/C LOC647288 chr13:75811890-75814517:- -0.51 -9.18 1.3E-18 Box Plot
THCA rs55939586 chr2:101062554 C/G LOC285359 chr3:101431278-101432259:+ 0.35 5.9 6.72E-9 Box Plot